Nf-core is a framework that provides a community-driven, peer-reviewed platform for the development of best practice analysis pipelines written in Nextflow.
- A collection of tools that users can help to build and develop
- Workflows are available for wide varieties of data
- Lots of downloadable content for power users
The tools available on this platform will be a challenge for users who are not familiar with coding. The workflows are meant to be used with advanced computational tools and large datasets.
There is a comprehensive help page available for users to familiarize them with Next Flow and NF-core.
- Ewels, P. A., Peltzer, A., Fillinger, S., Alneberg, J., Patel, H., Wilm, A., ... & Nahnsen, S. (2019). nf-core: Community curated bioinformatics pipelines. bioRxiv, 610741.
- Ewels, P. A., Peltzer, A., Fillinger, S., Patel, H., Alneberg, J., Wilm, A., ... & Nahnsen, S. (2020). The nf-core framework for community-curated bioinformatics pipelines. Nature Biotechnology, 38(3), 276-278.